Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015880408.1_cds_XP_016437487.1_33245
CDS Infomation

[gene=LOC107763515] [db_xref=GeneID:107763515] [protein=pentatricopeptide repeat-containing protein At1g02370, mitochondrial-like] [protein_id=XP_016437487.1] [location=complement(join(74350..75501,76751..77095))] [gbkey=CDS]
Sequence

ATGCTTCACTCACTGCAACTTAAGAGTACCAGAAAAATGGTGAGCAGAGCTACCTGTTTG
AGGCTTCTTCGATCAACGACGACATGTCGCCGATCGTTCTCTACAGAAATGGAGGTGGTA
GCGGAGACGGCGACGGTATCAACGTCGGCCATCACTCAAAACAACCGAAGAAACGCCGGT
CGCCGGAGATTGTCGGACCTTATGAACAGAGCAGACCCGCTTAAAACCAACTTCAAAGAT
GCTCTAAATAAATTGCATAACGAAGGGAAACCGTTAAGAAAGGTAGAGATTATTGACTGC
CTCAGCCATCTCCGTAGAAGCAATAGGTTTGATCTTGCCCTTCAGCTGTCTAAATGGATG
GAAATCAGCAAAATTACGATCAGCGATGCCGATCGTGCAATACGGATAGACCTTCTGGCC
AAGACAGAAGGCACAGATTCAGCCGAAAAGTATTTTGACAGCCTGCAAGAATCTGAAAAA
ACTAGTAAAACCTATGGAGCACTTCTCTGGTGTTATTGCAGGAAGAAAATGCTGGATAAG
GGTTTGAAGCTTTTTGAGAAGATGAAAGAGCTCAATTTTGCATCTACCTTAAATTATAAC
AATGTCATATCTCTTTATTTAAGCAATGGCCAGCCTGAAAAAGTCCCTCCACTGGTTCAA
GAAATGGAGCAGAGAAATATTGCAGCTGATTTGTATACCTATAATCAGTTGATGACCAGC
TATGTTTCGGTAAAGGATATAGTATCAGTTGAGGATGTTCTTGAAAATATGGAAAACAAT
CAGGTAAAGTTGGACTGGTTCACGTATGGAAACCTAGCTGGCATGTATATCAATACCGGC
GACCTTGATAAGGCGAATGGTATTCTTCAAAAGATGGAGAAATTAGAAGATATAAATGAC
CGTGAGGCATTCCACACCCTAATCACGTTGTATCAGAAAACATCTAATTCGTCAGGAGTC
AATCGTGCATGGGAATCATTGAAGTCGGTTGTTCCAACTCCCAGTAAGGTGAGCTATCTC
ATTGTGCTTGTAGCGTTATCCAAAGTAGGGGATTTGGAAAACCTTGAGAAGTGTTTTAGA
GAATGGGACTCAGGCTGTAGACATGAAATCAGAATTTCTAATGTGATGATAGAGTCCTAT
CTCAAGAGAAATATGATTGAAGAAGCAAATTCGGTTTATGAGAATGTGTTGAAACAAGGT
GTTGAACCCAACTTAAGAACTTTTGGTGCATTCACAAATTACTTTATAAAAAATACTCAG
ATAGATTTGGCTCTGAAGTATTTGGAGATGGGTGCCAGCAAGGCAAATCCTGAGAAACGT
TGTTGGTTCCCTGTGGATGAAACCATCAAGATGTTTCTAGCATACTTCGAGGATAATAGT
GACCCTGTCAGAGTTAAGCAATTCTGCGAGATTATGAAGAAGATTAATCGTCTCGATTCC
ACTGTATATGACTCTCTTCTAAGCAAAAACTATGCAGCCTCTGAAGTGGAATTATGA

Peptide Sequence

PEP ID

XP_016437487.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At1g02370, mitochondrial-like [Nicotiana tabacum]
Sequence

MLHSLQLKSTRKMVSRATCLRLLRSTTTCRRSFSTEMEVVAETATVSTSAITQNNRRNAG
RRRLSDLMNRADPLKTNFKDALNKLHNEGKPLRKVEIIDCLSHLRRSNRFDLALQLSKWM
EISKITISDADRAIRIDLLAKTEGTDSAEKYFDSLQESEKTSKTYGALLWCYCRKKMLDK
GLKLFEKMKELNFASTLNYNNVISLYLSNGQPEKVPPLVQEMEQRNIAADLYTYNQLMTS
YVSVKDIVSVEDVLENMENNQVKLDWFTYGNLAGMYINTGDLDKANGILQKMEKLEDIND
REAFHTLITLYQKTSNSSGVNRAWESLKSVVPTPSKVSYLIVLVALSKVGDLENLEKCFR
EWDSGCRHEIRISNVMIESYLKRNMIEEANSVYENVLKQGVEPNLRTFGAFTNYFIKNTQ
IDLALKYLEMGASKANPEKRCWFPVDETIKMFLAYFEDNSDPVRVKQFCEIMKKINRLDS
TVYDSLLSKNYAASEVEL

Transcript Sequence

Gene sequence data has not been registered.